Functional clusters

Information

  • Type MapMan
  • Description RNA processing.organelle machinery.pre-mRNA splicing.mitochondrial RNA splicing.group-II intron splicing.type-I splicing factor (nMAT1/2)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00002 1 CH_atr_325 2 2 0.000794407
Corylus avellana 4 1 CH_cav_340 2 2 0.000230008
Carica papaya supercontig_166 1 CH_cpa_290 2 2 0.000285198
Nelumbo nucifera chr6 1 CH_nnu_356 2 2 0.000261609
Amborella trichopoda AmTr_v1.0_scaffold00002 2 CH_atr_325 2 2 0.000794407
Corylus avellana 4 2 CH_cav_340 2 2 0.000230008
Carica papaya supercontig_166 2 CH_cpa_290 2 2 0.000285198
Nelumbo nucifera chr6 2 CH_nnu_356 2 2 0.000261609

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001