Functional clusters

Information

  • Type MapMan
  • Description RNA processing.organelle machinery.pre-mRNA splicing.plastidial RNA splicing.group-II intron splicing.RNA helicase (ISE2)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group12 1 CH_ach_24 3 4 0.0000000177048
Sequoiadendron giganteum chr10 1 CH_sgi_743 2 2 0.0000487151
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_205 2 2 0.0000929238
Actinidia chinensis Lachesis_group12 2 CH_ach_24 3 4 0.0000000177048
Sequoiadendron giganteum chr10 2 CH_sgi_743 2 2 0.0000487151
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_205 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001