Functional clusters
Information
- Type MapMan
- Description RNA processing.messenger ribonucleoparticle (mRNP) export.mRNP remodeling
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00049 | 1 | CH_atr_321 | 2 | 3 | 0.000714919 |
| Ceratophyllum demersum | 4 | 1 | CH_cde_290 | 2 | 2 | 0.000789796 |
| Amborella trichopoda | AmTr_v1.0_scaffold00049 | 2 | CH_atr_321 | 2 | 3 | 0.000714919 |
| Ceratophyllum demersum | 4 | 2 | CH_cde_290 | 2 | 2 | 0.000789796 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| 16.10.3.1 | RNA processing.messenger ribonucleoparticle (mRNP) export.mRNP remodeling.ATP-dependent helicase (DBP5/LOS4) | 6 |
| 16.10.3.2 | RNA processing.messenger ribonucleoparticle (mRNP) export.mRNP remodeling.LOS4 helicase-regulatory factor (GLE1) | 16 |
| 16.10.3.3 | RNA processing.messenger ribonucleoparticle (mRNP) export.mRNP remodeling.regulatory factor (LNO1) | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |