Functional clusters

Information

  • Type MapMan
  • Description RNA processing.messenger ribonucleoparticle (mRNP) export.TREX-2 mRNP trafficking complex.component PCID2/Thp1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00136 1 CH_atr_195 2 2 0.0000794407
Brassica carinata ChrB04 1 CH_bca_1002 2 2 0.00059854
Brassica carinata ChrB03 1 CH_bca_1003 2 2 0.00059854
Hydrangea macrophylla Hma1.2p1_0800F.1 1 CH_hma_264 2 2 0.000111086
Vanilla planifolia CM028154.1 1 CH_vpl_183 2 2 0.000073888
Amborella trichopoda AmTr_v1.0_scaffold00136 2 CH_atr_195 2 2 0.0000794407
Brassica carinata ChrB04 2 CH_bca_1002 2 2 0.00059854
Brassica carinata ChrB03 2 CH_bca_1003 2 2 0.00059854
Hydrangea macrophylla Hma1.2p1_0800F.1 2 CH_hma_264 2 2 0.000111086
Vanilla planifolia CM028154.1 2 CH_vpl_183 2 2 0.000073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001