Functional clusters

Information

  • Type MapMan
  • Description RNA processing.messenger ribonucleoparticle (mRNP) export.TREX/THO mRNP trafficking complex.THO subcomplex.component THOC2/Tho2

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB03 1 CH_bca_696 2 2 0.000128259
Camellia sinensis var. sinensis Chr12 1 CH_camsi_533 2 2 0.0000458547
Citrus clementina scaffold_2 1 CH_ccl_289 2 2 0.0000820311
Ceratophyllum demersum 3 1 CH_cde_221 2 2 0.000473878
Carica papaya supercontig_2 1 CH_cpa_329 2 4 0.000570342
Lonicera japonica GWHAAZE00000003 1 CH_lonja_359 2 2 0.0000598874
Nicotiana tabacum Nitab4.5_0000011 1 CH_nta_23 3 3 0.0000000180611
Rhododendron simsii chr04 1 CH_rsi_202 3 4 0.000000249841
Sapria himalayana scaffold6_19132642 1 CH_shi_148 2 3 0.000171536
Brassica carinata ChrB03 2 CH_bca_696 2 2 0.000128259
Camellia sinensis var. sinensis Chr12 2 CH_camsi_533 2 2 0.0000458547
Citrus clementina scaffold_2 2 CH_ccl_289 2 2 0.0000820311
Ceratophyllum demersum 3 2 CH_cde_221 2 2 0.000473878
Carica papaya supercontig_2 2 CH_cpa_329 2 4 0.000570342
Gossypium hirsutum D02 2 CH_ghi_487 2 2 0.0000801047
Lonicera japonica GWHAAZE00000003 2 CH_lonja_359 2 2 0.0000598874
Nicotiana tabacum Nitab4.5_0000011 2 CH_nta_23 3 3 0.0000000180611
Rhododendron simsii chr04 2 CH_rsi_202 3 4 0.000000249841
Sapria himalayana scaffold6_19132642 2 CH_shi_148 2 3 0.000171536

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001