Functional clusters

Information

  • Type MapMan
  • Description RNA processing.messenger ribonucleoparticle (mRNP) export.TREX/THO mRNP trafficking complex.THO subcomplex.component THOC1/HPR1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_228 1 CH_aag_95 2 2 0.0000802568
Cannabis sativa NC_044373.1 1 CH_cansat_359 2 3 0.000590945
Coffea canephora chr0 1 CH_ccan_334 2 20 0.000579193
Lonicera japonica GWHAAZE00000009 1 CH_lonja_173 3 4 0.000000021519
Sechium edule LG04 1 CH_sed_245 2 3 0.000214018
Sequoiadendron giganteum chr10 1 CH_sgi_395 3 3 0.00000000355983
Anthoceros agrestis Sc2ySwM_228 2 CH_aag_95 2 2 0.0000802568
Cannabis sativa NC_044373.1 2 CH_cansat_359 2 3 0.000590945
Coffea canephora chr0 2 CH_ccan_334 2 20 0.000579193
Lonicera japonica GWHAAZE00000009 2 CH_lonja_173 3 4 0.000000021519
Sechium edule LG04 2 CH_sed_245 2 3 0.000214018
Sequoiadendron giganteum chr10 2 CH_sgi_395 3 3 0.00000000355983

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001