Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (AP2-RAV)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC08 1 CH_bca_355 5 64 0.000000952315
Brassica carinata ChrB07 1 CH_bca_970 4 73 0.000551828
Brassica napus A06 1 CH_bna_445 4 42 0.0000435861
Brassica napus C06 1 CH_bna_565 4 65 0.000262509
Brassica oleracea C6 1 CH_bol_255 4 64 0.0000660487
Brassica rapa A06 1 CH_bra_191 4 46 0.0000384647
Eutrema salsugineum scaffold_7 1 CH_esa_114 3 4 0.00000194812
Oryza sativa ssp. japonica chr01 1 CH_osa_319 2 2 0.000316874
Striga asiatica scaffold36 1 CH_sas_22 3 5 0.000000586561
Sequoiadendron giganteum chr7 1 CH_sgi_116 6 9 3.63017e-18
Brassica carinata ChrC08 2 CH_bca_355 5 64 0.000000952315
Brassica carinata ChrB07 2 CH_bca_970 4 73 0.000551828
Brassica oleracea C6 2 CH_bol_255 4 64 0.0000660487
Brassica rapa A06 2 CH_bra_191 4 46 0.0000384647
Eutrema salsugineum scaffold_7 2 CH_esa_114 3 4 0.00000194812
Oryza sativa ssp. japonica chr01 2 CH_osa_319 2 2 0.000316874
Striga asiatica scaffold36 2 CH_sas_22 3 5 0.000000586561
Sequoiadendron giganteum chr7 2 CH_sgi_116 6 9 3.63017e-18

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001