Functional clusters
Information
- Type MapMan
- Description RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (AP2)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr8 | 1 | CH_acertr_203 | 3 | 3 | 0.0000084987 |
| Magnolia biondii | Chr08 | 1 | CH_mbi_391 | 3 | 7 | 0.000140981 |
| Papaver somniferum | NC_039359.1 | 1 | CH_pso_183 | 4 | 6 | 0.0000000140929 |
| Papaver somniferum | NC_039359.1 | 1 | CH_pso_444 | 3 | 5 | 0.0000694999 |
| Sequoiadendron giganteum | chr9 | 1 | CH_sgi_157 | 7 | 12 | 0.00000000000000218695 |
| Acer truncatum | chr8 | 2 | CH_acertr_203 | 3 | 3 | 0.0000084987 |
| Magnolia biondii | Chr08 | 2 | CH_mbi_391 | 3 | 7 | 0.000140981 |
| Papaver somniferum | NC_039359.1 | 2 | CH_pso_183 | 4 | 6 | 0.0000000140929 |
| Papaver somniferum | NC_039359.1 | 2 | CH_pso_444 | 3 | 5 | 0.0000694999 |
| Sequoiadendron giganteum | chr9 | 2 | CH_sgi_157 | 7 | 12 | 0.00000000000000218695 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |