Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.transcriptional regulation.transcriptional co-regulator (Pirin)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica oleracea C8 1 CH_bol_419 2 2 0.000686409
Capsicum annuum PGAv.1.6.scaffold710 1 CH_can_172 3 5 0.0000010235
Coffea canephora chr3 1 CH_ccan_149 3 65 0.0000102866
Ceratophyllum demersum 2 1 CH_cde_43 3 6 0.000000748407
Carya illinoinensis Chr01 1 CH_cil_121 4 4 0.000000000025006
Daucus carota DCARv2_Chr2 1 CH_dca_274 2 3 0.000191327
Petunia axillaris Peaxi162Scf00286 1 CH_pax_337 2 3 0.000633164
Quercus lobata 8 1 CH_qlo_829 2 2 0.000154887
Sequoiadendron giganteum chr5 1 CH_sgi_108 6 6 5.18665e-19
Solanum pennellii Spenn-ch09 1 CH_spe_538 2 3 0.000800581
Solanum tuberosum ST4.03ch09 1 CH_stu_638 2 3 0.00092236
Brassica oleracea C8 2 CH_bol_419 2 2 0.000686409
Capsicum annuum PGAv.1.6.scaffold710 2 CH_can_172 3 5 0.0000010235
Coffea canephora chr3 2 CH_ccan_149 3 65 0.0000102866
Ceratophyllum demersum 2 2 CH_cde_43 3 6 0.000000748407
Carya illinoinensis Chr01 2 CH_cil_121 4 4 0.000000000025006
Daucus carota DCARv2_Chr2 2 CH_dca_274 2 3 0.000191327
Eucalyptus grandis Chr06 2 CH_egr_796 2 2 0.000175582
Petunia axillaris Peaxi162Scf00286 2 CH_pax_337 2 3 0.000633164
Quercus lobata 8 2 CH_qlo_829 2 2 0.000154887
Sequoiadendron giganteum chr5 2 CH_sgi_108 6 6 5.18665e-19
Solanum pennellii Spenn-ch09 2 CH_spe_538 2 3 0.000800581
Solanum tuberosum ST4.03ch09 2 CH_stu_638 2 3 0.00092236

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001