Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.transcriptional regulation.transcriptional repression.transcriptional repressor (NF-X1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cannabis sativa NC_044372.1 1 CH_cansat_326 2 4 0.000393959
Chenopodium quinoa C_Quinoa_Scaffold_1783 1 CH_cqu_593 2 3 0.000852831
Helianthus annuus HanXRQChr01 1 CH_han_716 3 47 0.000724411
Nelumbo nucifera chr3 1 CH_nnu_389 2 3 0.000392399
Physcomitrium patens Chr25 1 CH_ppa_176 2 2 0.000183818
Trochodendron aralioides group1 1 CH_tar_366 2 2 0.00018011
Cannabis sativa NC_044372.1 2 CH_cansat_326 2 4 0.000393959
Chenopodium quinoa C_Quinoa_Scaffold_1783 2 CH_cqu_593 2 3 0.000852831
Helianthus annuus HanXRQChr01 2 CH_han_716 3 47 0.000724411
Nelumbo nucifera chr3 2 CH_nnu_389 2 3 0.000392399
Physcomitrium patens Chr25 2 CH_ppa_176 2 2 0.000183818
Trochodendron aralioides group1 2 CH_tar_366 2 2 0.00018011

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001