Functional clusters
Information
- Type MapMan
- Description RNA biosynthesis.transcriptional regulation.transcriptional repression.transcriptional co-repressor (AFP/NINJA)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Daucus carota | DCARv2_Chr7 | 1 | CH_dca_477 | 2 | 2 | 0.000956663 |
| Simmondsia chinensis | GWHAASQ00000024 | 1 | CH_sci_304 | 2 | 2 | 0.000851426 |
| Sequoiadendron giganteum | chr1 | 1 | CH_sgi_554 | 3 | 4 | 0.000000284764 |
| Solanum lycopersicum | SL4.0ch02 | 1 | CH_sly_141 | 4 | 5 | 0.0000000268469 |
| Solanum lycopersicum | SL4.0ch02 | 1 | CH_sly_37 | 7 | 9 | 2.84034e-17 |
| Solanum lycopersicum | SL4.0ch02 | 1 | CH_sly_51 | 6 | 8 | 0.0000000000000442726 |
| Solanum pennellii | Spenn-ch02 | 1 | CH_spe_209 | 3 | 5 | 0.00000652656 |
| Solanum tuberosum | ST4.03ch02 | 1 | CH_stu_217 | 3 | 3 | 0.000000472706 |
| Daucus carota | DCARv2_Chr7 | 2 | CH_dca_477 | 2 | 2 | 0.000956663 |
| Simmondsia chinensis | GWHAASQ00000024 | 2 | CH_sci_304 | 2 | 2 | 0.000851426 |
| Sequoiadendron giganteum | chr1 | 2 | CH_sgi_554 | 3 | 4 | 0.000000284764 |
| Solanum lycopersicum | SL4.0ch02 | 2 | CH_sly_141 | 4 | 5 | 0.0000000268469 |
| Solanum lycopersicum | SL4.0ch02 | 2 | CH_sly_37 | 7 | 9 | 2.84034e-17 |
| Solanum lycopersicum | SL4.0ch02 | 2 | CH_sly_51 | 6 | 8 | 0.0000000000000442726 |
| Solanum pennellii | Spenn-ch02 | 2 | CH_spe_209 | 3 | 5 | 0.00000652656 |
| Solanum tuberosum | ST4.03ch02 | 2 | CH_stu_217 | 3 | 3 | 0.000000472706 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |