Functional clusters
Information
- Type MapMan
- Description RNA biosynthesis.transcriptional regulation.bZIP transcription factor superfamily.transcription factor (bZIP)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | ChrC02 | 1 | CH_bca_1113 | 3 | 3 | 0.00082125 |
| Brassica napus | A04 | 1 | CH_bna_471 | 4 | 7 | 0.0000610735 |
| Brassica rapa | A04 | 1 | CH_bra_201 | 4 | 7 | 0.0000459717 |
| Physcomitrium patens | Chr19 | 1 | CH_ppa_115 | 3 | 3 | 0.0000695005 |
| Physcomitrium patens | Chr22 | 1 | CH_ppa_314 | 3 | 5 | 0.000693686 |
| Papaver somniferum | NC_039362.1 | 1 | CH_pso_13 | 10 | 11 | 5.24717e-25 |
| Papaver somniferum | NC_039358.1 | 1 | CH_pso_17 | 10 | 16 | 3.80449e-22 |
| Tarenaya hassleriana | NW_010970652.1 | 1 | CH_tha_52 | 5 | 7 | 0.00000013787 |
| Brassica carinata | ChrC02 | 2 | CH_bca_1113 | 3 | 3 | 0.00082125 |
| Brassica rapa | A04 | 2 | CH_bra_201 | 4 | 7 | 0.0000459717 |
| Physcomitrium patens | Chr19 | 2 | CH_ppa_115 | 3 | 3 | 0.0000695005 |
| Physcomitrium patens | Chr22 | 2 | CH_ppa_314 | 3 | 5 | 0.000693686 |
| Papaver somniferum | NC_039362.1 | 2 | CH_pso_13 | 10 | 11 | 5.24717e-25 |
| Papaver somniferum | NC_039358.1 | 2 | CH_pso_17 | 10 | 16 | 3.80449e-22 |
| Tarenaya hassleriana | NW_010970652.1 | 2 | CH_tha_52 | 5 | 7 | 0.00000013787 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |