Functional clusters
Information
- Type MapMan
- Description RNA biosynthesis.transcriptional regulation.transcription factor (OFP)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr3 | 1 | CH_acertr_234 | 3 | 5 | 0.0000271185 |
| Davidia involucrata | GWHABJS00000007 | 1 | CH_din_191 | 4 | 12 | 0.00000581913 |
| Olea europaea | chr17 | 1 | CH_oeu_118 | 3 | 3 | 0.00000865072 |
| Quercus lobata | 1 | 1 | CH_qlo_542 | 4 | 18 | 0.00000384911 |
| Solanum lycopersicum | SL4.0ch10 | 1 | CH_sly_72 | 6 | 15 | 0.00000000000583191 |
| Solanum tuberosum | ST4.03ch10 | 1 | CH_stu_127 | 4 | 4 | 0.00000000510748 |
| Trochodendron aralioides | group2 | 1 | CH_tar_223 | 3 | 3 | 0.0000243034 |
| Acer truncatum | chr3 | 2 | CH_acertr_234 | 3 | 5 | 0.0000271185 |
| Davidia involucrata | GWHABJS00000007 | 2 | CH_din_191 | 4 | 12 | 0.00000581913 |
| Olea europaea | chr17 | 2 | CH_oeu_118 | 3 | 3 | 0.00000865072 |
| Quercus lobata | 1 | 2 | CH_qlo_542 | 4 | 18 | 0.00000384911 |
| Solanum lycopersicum | SL4.0ch10 | 2 | CH_sly_72 | 6 | 15 | 0.00000000000583191 |
| Solanum tuberosum | ST4.03ch10 | 2 | CH_stu_127 | 4 | 4 | 0.00000000510748 |
| Trochodendron aralioides | group2 | 2 | CH_tar_223 | 3 | 3 | 0.0000243034 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |