Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (LD)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group19 1 CH_ach_218 2 5 0.000543168
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.06 1 CH_arhy_762 2 5 0.000898083
Lupinus albus Lalb_Chr18 1 CH_lal_275 2 2 0.000157447
Lonicera japonica GWHAAZE00000002 1 CH_lonja_391 2 2 0.0000598874
Magnolia biondii Chr19 1 CH_mbi_676 2 3 0.00087414
Petunia axillaris Peaxi162Scf00067 1 CH_pax_210 2 2 0.0000703556
Solanum lycopersicum SL4.0ch09 1 CH_sly_135 3 4 0.00000002067
Solanum pennellii Spenn-ch09 1 CH_spe_341 2 3 0.000133434
Actinidia chinensis Lachesis_group19 2 CH_ach_218 2 5 0.000543168
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.06 2 CH_arhy_762 2 5 0.000898083
Eucalyptus grandis Chr08 2 CH_egr_692 2 2 0.0000585274
Lupinus albus Lalb_Chr18 2 CH_lal_275 2 2 0.000157447
Lonicera japonica GWHAAZE00000002 2 CH_lonja_391 2 2 0.0000598874
Magnolia biondii Chr19 2 CH_mbi_676 2 3 0.00087414
Petunia axillaris Peaxi162Scf00067 2 CH_pax_210 2 2 0.0000703556
Solanum lycopersicum SL4.0ch09 2 CH_sly_135 3 4 0.00000002067
Solanum pennellii Spenn-ch09 2 CH_spe_341 2 3 0.000133434

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001