Functional clusters
Information
- Type MapMan
- Description RNA biosynthesis.transcriptional regulation.transcription factor (Trihelix)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | ChrC01 | 1 | CH_bca_217 | 4 | 4 | 0.0000000538513 |
| Brassica carinata | ChrB02 | 1 | CH_bca_599 | 3 | 3 | 0.0000629784 |
| Brassica carinata | ChrB01 | 1 | CH_bca_600 | 3 | 3 | 0.0000629784 |
| Corylus avellana | 1 | 1 | CH_cav_178 | 4 | 12 | 0.00000589758 |
| Papaver somniferum | NC_039358.1 | 1 | CH_pso_458 | 3 | 6 | 0.00012827 |
| Populus trichocarpa | Chr18 | 1 | CH_ptr_517 | 3 | 5 | 0.000662496 |
| Sechium edule | LG10 | 1 | CH_sed_279 | 3 | 5 | 0.000415856 |
| Brassica carinata | ChrC01 | 2 | CH_bca_217 | 4 | 4 | 0.0000000538513 |
| Brassica carinata | ChrB02 | 2 | CH_bca_599 | 3 | 3 | 0.0000629784 |
| Brassica carinata | ChrB01 | 2 | CH_bca_600 | 3 | 3 | 0.0000629784 |
| Corylus avellana | 1 | 2 | CH_cav_178 | 4 | 12 | 0.00000589758 |
| Papaver somniferum | NC_039358.1 | 2 | CH_pso_458 | 3 | 6 | 0.00012827 |
| Populus trichocarpa | Chr18 | 2 | CH_ptr_517 | 3 | 5 | 0.000662496 |
| Sechium edule | LG10 | 2 | CH_sed_279 | 3 | 5 | 0.000415856 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |