Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.transcriptional regulation.transcription factor (SBP)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_344 1 CH_aag_166 2 2 0.000481541
Daucus carota DCARv2_Chr4 1 CH_dca_181 3 3 0.00000811507
Lactuca sativa Lsat_1_v8_lg_1 1 CH_lsa_286 3 3 0.0000115922
Malus domestica Chr06 1 CH_mdo_725 3 8 0.00072118
Manihot esculenta Chromosome13 1 CH_mes_219 5 36 0.0000025414
Marchantia polymorpha scaffold_14 1 CH_mpo_124 2 2 0.000662654
Medicago truncatula chr8 1 CH_mtr_416 3 3 0.00000512513
Physcomitrium patens Chr16 1 CH_ppa_65 3 5 0.0000160982
Tarenaya hassleriana NW_010967884.1 1 CH_tha_98 3 4 0.0000389129
Anthoceros agrestis Sc2ySwM_344 2 CH_aag_166 2 2 0.000481541
Daucus carota DCARv2_Chr4 2 CH_dca_181 3 3 0.00000811507
Lactuca sativa Lsat_1_v8_lg_1 2 CH_lsa_286 3 3 0.0000115922
Malus domestica Chr06 2 CH_mdo_725 3 8 0.00072118
Manihot esculenta Chromosome13 2 CH_mes_219 5 36 0.0000025414
Marchantia polymorpha scaffold_14 2 CH_mpo_124 2 2 0.000662654
Physcomitrium patens Chr16 2 CH_ppa_65 3 5 0.0000160982
Tarenaya hassleriana NW_010967884.1 2 CH_tha_98 3 4 0.0000389129

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001