Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.SPT4-SPT5 transcription elongation complex.component SPT4

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB01 1 CH_bca_786 2 2 0.000213764
Lotus japonicus chr5 1 CH_lja_141 3 5 0.000000306774
Medicago truncatula chr3 1 CH_mtr_508 2 2 0.0000410863
Nicotiana tabacum Nitab4.5_0000129 1 CH_nta_95 2 2 0.000109727
Salvia bowleyana GWHASIU00000002 1 CH_sbo_370 2 2 0.000272988
Salvia bowleyana GWHASIU00000004 1 CH_sbo_371 2 2 0.000272988
Brassica carinata ChrB01 2 CH_bca_786 2 2 0.000213764
Lotus japonicus chr5 2 CH_lja_141 3 5 0.000000306774
Nicotiana tabacum Nitab4.5_0000129 2 CH_nta_95 2 2 0.000109727
Salvia bowleyana GWHASIU00000002 2 CH_sbo_370 2 2 0.000272988
Salvia bowleyana GWHASIU00000004 2 CH_sbo_371 2 2 0.000272988

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001