Functional clusters
Information
- Type MapMan
- Description RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.SPT4-SPT5 transcription elongation complex.component SPT4
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Brassica carinata | ChrB01 | 1 | CH_bca_786 | 2 | 2 | 0.000213764 |
Lotus japonicus | chr5 | 1 | CH_lja_141 | 3 | 5 | 0.000000306774 |
Medicago truncatula | chr3 | 1 | CH_mtr_508 | 2 | 2 | 0.0000410863 |
Nicotiana tabacum | Nitab4.5_0000129 | 1 | CH_nta_95 | 2 | 2 | 0.000109727 |
Salvia bowleyana | GWHASIU00000002 | 1 | CH_sbo_370 | 2 | 2 | 0.000272988 |
Salvia bowleyana | GWHASIU00000004 | 1 | CH_sbo_371 | 2 | 2 | 0.000272988 |
Brassica carinata | ChrB01 | 2 | CH_bca_786 | 2 | 2 | 0.000213764 |
Lotus japonicus | chr5 | 2 | CH_lja_141 | 3 | 5 | 0.000000306774 |
Nicotiana tabacum | Nitab4.5_0000129 | 2 | CH_nta_95 | 2 | 2 | 0.000109727 |
Salvia bowleyana | GWHASIU00000002 | 2 | CH_sbo_370 | 2 | 2 | 0.000272988 |
Salvia bowleyana | GWHASIU00000004 | 2 | CH_sbo_371 | 2 | 2 | 0.000272988 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |