Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.MEDIATOR complex.other components.component MED25

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr11 1 CH_acertr_461 2 4 0.000422952
Camellia sinensis var. sinensis Chr10 1 CH_camsi_322 3 11 0.000000520324
Capsicum annuum PGAv.1.6.scaffold2 1 CH_can_329 2 2 0.000247831
Carya illinoinensis Chr16 1 CH_cil_391 2 3 0.000185943
Erigeron canadensis Conyza_canadensis_scaffold:8 1 CH_eca_335 2 2 0.000134617
Glycine max Gm01 1 CH_gma_491 2 2 0.000379557
Glycine max Gm02 1 CH_gma_492 2 2 0.000379557
Helianthus annuus HanXRQChr17 1 CH_han_492 2 2 0.000115929
Lactuca sativa Lsat_1_v8_lg_4 1 CH_lsa_384 2 2 0.000154202
Magnolia biondii Chr01 1 CH_mbi_433 2 2 0.000145698
Malus domestica Chr16 1 CH_mdo_628 2 5 0.00037919
Punica granatum NC_045128.1 1 CH_pgr_194 2 2 0.0000750356
Papaver somniferum NC_039362.1 1 CH_pso_513 2 3 0.000202706
Phaseolus vulgaris Chr04 1 CH_pvu_338 2 2 0.000220418
Sequoiadendron giganteum chr9 1 CH_sgi_379 3 3 0.00000000355983
Acer truncatum chr11 2 CH_acertr_461 2 4 0.000422952
Camellia sinensis var. sinensis Chr10 2 CH_camsi_322 3 11 0.000000520324
Capsicum annuum PGAv.1.6.scaffold2 2 CH_can_329 2 2 0.000247831
Carya illinoinensis Chr16 2 CH_cil_391 2 3 0.000185943
Erigeron canadensis Conyza_canadensis_scaffold:8 2 CH_eca_335 2 2 0.000134617
Glycine max Gm01 2 CH_gma_491 2 2 0.000379557
Glycine max Gm02 2 CH_gma_492 2 2 0.000379557
Helianthus annuus HanXRQChr17 2 CH_han_492 2 2 0.000115929
Lotus japonicus chr2 2 CH_lja_401 2 3 0.000715077
Lotus japonicus chr2 2 CH_lja_402 2 2 0.000715077
Lactuca sativa Lsat_1_v8_lg_4 2 CH_lsa_384 2 2 0.000154202
Magnolia biondii Chr01 2 CH_mbi_433 2 2 0.000145698
Malus domestica Chr16 2 CH_mdo_628 2 5 0.00037919
Punica granatum NC_045128.1 2 CH_pgr_194 2 2 0.0000750356
Papaver somniferum NC_039362.1 2 CH_pso_513 2 3 0.000202706
Phaseolus vulgaris Chr04 2 CH_pvu_338 2 2 0.000220418
Sequoiadendron giganteum chr9 2 CH_sgi_379 3 3 0.00000000355983

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001