Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.MEDIATOR complex.regulatory kinase module.component MED13

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group3 1 CH_ach_84 2 2 0.0000543213
Capsicum annuum PGAv.1.6.scaffold1237 1 CH_can_297 3 25 0.0000940322
Ceratophyllum demersum 8 1 CH_cde_149 2 2 0.000236939
Carya illinoinensis Chr14 1 CH_cil_412 2 2 0.000185948
Carica papaya supercontig_119 1 CH_cpa_161 2 2 0.0000950661
Chenopodium quinoa C_Quinoa_Scaffold_3107 1 CH_cqu_345 2 2 0.000142146
Davidia involucrata GWHABJS00000014 1 CH_din_409 2 2 0.000300075
Erythranthe guttata scaffold_12 1 CH_egut_205 3 11 0.0000013119
Pisum sativum chr5LG3 1 CH_psa_419 2 4 0.000938861
Sequoiadendron giganteum chr6 1 CH_sgi_741 2 2 0.0000487151
Sapria himalayana scaffold84_1800311 1 CH_shi_6 4 4 0.00000000000056092
Trochodendron aralioides group7 1 CH_tar_245 2 2 0.0000600366
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_407 2 5 0.000929109
Vigna mungo CM024079.1 1 CH_vmu_176 2 2 0.0000646141
Actinidia chinensis Lachesis_group3 2 CH_ach_84 2 2 0.0000543213
Capsicum annuum PGAv.1.6.scaffold1237 2 CH_can_297 3 25 0.0000940322
Ceratophyllum demersum 8 2 CH_cde_149 2 2 0.000236939
Carya illinoinensis Chr14 2 CH_cil_412 2 2 0.000185948
Carica papaya supercontig_119 2 CH_cpa_161 2 2 0.0000950661
Chenopodium quinoa C_Quinoa_Scaffold_3107 2 CH_cqu_345 2 2 0.000142146
Davidia involucrata GWHABJS00000014 2 CH_din_409 2 2 0.000300075
Erythranthe guttata scaffold_12 2 CH_egut_205 3 11 0.0000013119
Pisum sativum chr5LG3 2 CH_psa_419 2 4 0.000938861
Sequoiadendron giganteum chr6 2 CH_sgi_741 2 2 0.0000487151
Sapria himalayana scaffold84_1800311 2 CH_shi_6 4 4 0.00000000000056092
Trochodendron aralioides group7 2 CH_tar_245 2 2 0.0000600366
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_407 2 5 0.000929109
Vigna mungo CM024079.1 2 CH_vmu_176 2 2 0.0000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001