Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.MEDIATOR complex.tail module.component MED16

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Capsicum annuum PGAv.1.6.scaffold1164 1 CH_can_251 2 2 0.0000826105
Lactuca sativa Lsat_1_v8_lg_7 1 CH_lsa_383 2 2 0.000154202
Malus domestica Chr05 1 CH_mdo_259 3 10 0.00000103515
Medicago truncatula chr2 1 CH_mtr_231 3 3 0.0000000101287
Populus trichocarpa Chr04 1 CH_ptr_359 2 2 0.0001734
Sequoiadendron giganteum chr9 1 CH_sgi_378 3 3 0.00000000355983
Sapria himalayana scaffold3_21451142 1 CH_shi_211 2 5 0.000571755
Trifolium pratense Tp57577_TGAC_v2_LG3 1 CH_tpr_291 2 2 0.000227092
Capsicum annuum PGAv.1.6.scaffold1164 2 CH_can_251 2 2 0.0000826105
Lactuca sativa Lsat_1_v8_lg_7 2 CH_lsa_383 2 2 0.000154202
Malus domestica Chr05 2 CH_mdo_259 3 10 0.00000103515
Populus trichocarpa Chr04 2 CH_ptr_359 2 2 0.0001734
Sequoiadendron giganteum chr9 2 CH_sgi_378 3 3 0.00000000355983
Sapria himalayana scaffold3_21451142 2 CH_shi_211 2 5 0.000571755
Trifolium pratense Tp57577_TGAC_v2_LG3 2 CH_tpr_291 2 2 0.000227092

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001