Functional clusters
Information
- Type MapMan
- Description RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.MEDIATOR complex.middle module.component MED7
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_6 | 1 | CH_aly_341 | 3 | 41 | 0.000278045 |
| Camellia sinensis var. sinensis | Chr10 | 1 | CH_camsi_209 | 3 | 4 | 0.0000000126159 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 1 | CH_rch_174 | 5 | 63 | 0.000000000797293 |
| Rhododendron simsii | chr04 | 1 | CH_rsi_128 | 4 | 12 | 0.00000000199451 |
| Sechium edule | LG12 | 1 | CH_sed_281 | 2 | 4 | 0.000428021 |
| Arabidopsis lyrata | scaffold_6 | 2 | CH_aly_341 | 3 | 41 | 0.000278045 |
| Camellia sinensis var. sinensis | Chr10 | 2 | CH_camsi_209 | 3 | 4 | 0.0000000126159 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 2 | CH_rch_174 | 5 | 63 | 0.000000000797293 |
| Rhododendron simsii | chr04 | 2 | CH_rsi_128 | 4 | 12 | 0.00000000199451 |
| Sechium edule | LG12 | 2 | CH_sed_281 | 2 | 4 | 0.000428021 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |