Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase II-dependent transcription.RNA polymerase-II phosphorylation/dephosphorylation.CTDK-I protein kinase complex.T-class cyclin regulatory component

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Fragaria vesca Fvb3 1 CH_fve_259 2 2 0.0000589102
Glycine max Gm20 1 CH_gma_497 2 2 0.000379557
Malus domestica Chr05 1 CH_mdo_454 2 2 0.000113763
Punica granatum NC_045131.1 1 CH_pgr_202 2 2 0.0000750356
Prunus persica Pp04 1 CH_ppe_323 2 2 0.0000745962
Rosa chinensis RcHm_v2.0_Chr5 1 CH_rch_470 2 2 0.0000398653
Trifolium pratense Tp57577_TGAC_v2_LG7 1 CH_tpr_93 3 4 0.000000137518
Fragaria vesca Fvb3 2 CH_fve_259 2 2 0.0000589102
Glycine max Gm20 2 CH_gma_497 2 2 0.000379557
Lotus japonicus chr3 2 CH_lja_392 2 3 0.000643531
Malus domestica Chr05 2 CH_mdo_454 2 2 0.000113763
Punica granatum NC_045131.1 2 CH_pgr_202 2 2 0.0000750356
Prunus persica Pp04 2 CH_ppe_323 2 2 0.0000745962
Rosa chinensis RcHm_v2.0_Chr5 2 CH_rch_470 2 2 0.0000398653
Trifolium pratense Tp57577_TGAC_v2_LG7 2 CH_tpr_93 3 4 0.000000137518

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001