Functional clusters

Information

  • Type MapMan
  • Description DNA damage response.base excision repair (BER).methyladenine-DNA glycosylase (MAG)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB06 1 CH_bca_640 2 2 0.0000641293
Erigeron canadensis Conyza_canadensis_scaffold:9 1 CH_eca_202 3 12 0.00000265696
Pisum sativum chr3LG5 1 CH_psa_68 3 3 0.00000000408165
Quercus lobata 7 1 CH_qlo_1010 2 6 0.000774353
Rhododendron simsii chr04 1 CH_rsi_416 2 3 0.000193586
Sapria himalayana scaffold90_1626485 1 CH_shi_200 2 4 0.000343063
Brassica carinata ChrB06 2 CH_bca_640 2 2 0.0000641293
Erigeron canadensis Conyza_canadensis_scaffold:9 2 CH_eca_202 3 12 0.00000265696
Pisum sativum chr3LG5 2 CH_psa_68 3 3 0.00000000408165
Quercus lobata 7 2 CH_qlo_1010 2 6 0.000774353
Rhododendron simsii chr04 2 CH_rsi_416 2 3 0.000193586
Sapria himalayana scaffold90_1626485 2 CH_shi_200 2 4 0.000343063

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001