Functional clusters

Information

  • Type MapMan
  • Description DNA damage response.homologous recombination repair (HR).Smc5-Smc6 complex.NSE1-NSE3-NSE4 subcomplex.Kleisin-like bridging component NSE4

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group10 1 CH_ach_284 2 4 0.000977694
Amaranthus hybridus AmaHy_arrow1_Scaffold_6 1 CH_amhyb_169 3 29 0.00015505
Citrus clementina scaffold_6 1 CH_ccl_467 2 3 0.000738229
Fragaria x ananassa Fvb3-1 1 CH_fan_200 3 5 0.00000146861
Fragaria vesca Fvb3 1 CH_fve_336 2 2 0.00017673
Lactuca sativa Lsat_1_v8_lg_2 1 CH_lsa_548 2 3 0.000925157
Papaver somniferum NC_039358.1 1 CH_pso_624 2 2 0.000472989
Quercus lobata 1 1 CH_qlo_932 2 3 0.00046464
Rosa chinensis RcHm_v2.0_Chr5 1 CH_rch_242 3 4 0.0000000381412
Actinidia chinensis Lachesis_group10 2 CH_ach_284 2 4 0.000977694
Amaranthus hybridus AmaHy_arrow1_Scaffold_6 2 CH_amhyb_169 3 29 0.00015505
Citrus clementina scaffold_6 2 CH_ccl_467 2 3 0.000738229
Fragaria x ananassa Fvb3-1 2 CH_fan_200 3 5 0.00000146861
Fragaria vesca Fvb3 2 CH_fve_336 2 2 0.00017673
Lactuca sativa Lsat_1_v8_lg_2 2 CH_lsa_548 2 3 0.000925157
Papaver somniferum NC_039358.1 2 CH_pso_624 2 2 0.000472989
Quercus lobata 1 2 CH_qlo_932 2 3 0.00046464
Rosa chinensis RcHm_v2.0_Chr5 2 CH_rch_242 3 4 0.0000000381412

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001