Functional clusters
Information
- Type MapMan
- Description DNA damage response.homologous recombination repair (HR).Smc5-Smc6 complex.NSE1-NSE3-NSE4 subcomplex.Kleisin-like bridging component NSE4
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Actinidia chinensis | Lachesis_group10 | 1 | CH_ach_284 | 2 | 4 | 0.000977694 |
Amaranthus hybridus | AmaHy_arrow1_Scaffold_6 | 1 | CH_amhyb_169 | 3 | 29 | 0.00015505 |
Citrus clementina | scaffold_6 | 1 | CH_ccl_467 | 2 | 3 | 0.000738229 |
Fragaria x ananassa | Fvb3-1 | 1 | CH_fan_200 | 3 | 5 | 0.00000146861 |
Fragaria vesca | Fvb3 | 1 | CH_fve_336 | 2 | 2 | 0.00017673 |
Lactuca sativa | Lsat_1_v8_lg_2 | 1 | CH_lsa_548 | 2 | 3 | 0.000925157 |
Papaver somniferum | NC_039358.1 | 1 | CH_pso_624 | 2 | 2 | 0.000472989 |
Quercus lobata | 1 | 1 | CH_qlo_932 | 2 | 3 | 0.00046464 |
Rosa chinensis | RcHm_v2.0_Chr5 | 1 | CH_rch_242 | 3 | 4 | 0.0000000381412 |
Actinidia chinensis | Lachesis_group10 | 2 | CH_ach_284 | 2 | 4 | 0.000977694 |
Amaranthus hybridus | AmaHy_arrow1_Scaffold_6 | 2 | CH_amhyb_169 | 3 | 29 | 0.00015505 |
Citrus clementina | scaffold_6 | 2 | CH_ccl_467 | 2 | 3 | 0.000738229 |
Fragaria x ananassa | Fvb3-1 | 2 | CH_fan_200 | 3 | 5 | 0.00000146861 |
Fragaria vesca | Fvb3 | 2 | CH_fve_336 | 2 | 2 | 0.00017673 |
Lactuca sativa | Lsat_1_v8_lg_2 | 2 | CH_lsa_548 | 2 | 3 | 0.000925157 |
Papaver somniferum | NC_039358.1 | 2 | CH_pso_624 | 2 | 2 | 0.000472989 |
Quercus lobata | 1 | 2 | CH_qlo_932 | 2 | 3 | 0.00046464 |
Rosa chinensis | RcHm_v2.0_Chr5 | 2 | CH_rch_242 | 3 | 4 | 0.0000000381412 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |