Functional clusters

Information

  • Type MapMan
  • Description DNA damage response.homologous recombination repair (HR).Smc5-Smc6 complex.NSE2-SMC5-SMC6 subcomplex.component SMC5

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group16 1 CH_ach_86 2 2 0.0000543213
Corylus avellana 1 1 CH_cav_391 2 4 0.000459982
Chlamydomonas reinhardtii chromosome_10 1 CH_cre_44 2 3 0.00034118
Hydrangea macrophylla Hma1.2p1_0685F.1 1 CH_hma_34 3 3 0.0000000185113
Salvia bowleyana GWHASIU00000003 1 CH_sbo_319 2 3 0.000136491
Sequoiadendron giganteum chr2 1 CH_sgi_1081 2 2 0.000146145
Vanilla planifolia CM028157.1 1 CH_vpl_235 2 3 0.000221656
Actinidia chinensis Lachesis_group16 2 CH_ach_86 2 2 0.0000543213
Corylus avellana 1 2 CH_cav_391 2 4 0.000459982
Chlamydomonas reinhardtii chromosome_10 2 CH_cre_44 2 3 0.00034118
Hydrangea macrophylla Hma1.2p1_0685F.1 2 CH_hma_34 3 3 0.0000000185113
Lotus japonicus chr3 2 CH_lja_257 2 2 0.0000715077
Salvia bowleyana GWHASIU00000003 2 CH_sbo_319 2 3 0.000136491
Sequoiadendron giganteum chr2 2 CH_sgi_1081 2 2 0.000146145
Vanilla planifolia CM028157.1 2 CH_vpl_235 2 3 0.000221656

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001