Functional clusters

Information

  • Type MapMan
  • Description Cell cycle organisation.germline development.male germ cell division.E3 ubiquitin protein ligase (APD)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_344 1 CH_aag_30 5 64 0.000000131792
Arabidopsis lyrata scaffold_4 1 CH_aly_321 2 2 0.000198013
Arabidopsis thaliana Chr2 1 CH_ath_118 3 5 0.0000000492448
Brassica carinata ChrB02 1 CH_bca_1097 2 2 0.000769551
Brassica napus A05 1 CH_bna_179 3 3 0.0000000433643
Brassica oleracea C4 1 CH_bol_308 2 2 0.000196117
Cardamine hirsuta Chr4 1 CH_chi_107 3 3 0.0000000286668
Capsella rubella scaffold_4 1 CH_cru_374 2 2 0.000438693
Eutrema salsugineum scaffold_10 1 CH_esa_182 2 2 0.0000761499
Lupinus albus Lalb_Chr08 1 CH_lal_274 2 2 0.000157447
Lonicera japonica GWHAAZE00000004 1 CH_lonja_549 2 2 0.000359324
Petunia axillaris Peaxi162Scf00141 1 CH_pax_236 2 3 0.00021106
Selenicereus undatus Scaffold_33675 1 CH_sun_246 2 2 0.000435983
Anthoceros agrestis Sc2ySwM_344 2 CH_aag_30 5 64 0.000000131792
Arabidopsis lyrata scaffold_4 2 CH_aly_321 2 2 0.000198013
Arabidopsis thaliana Chr2 2 CH_ath_118 3 5 0.0000000492448
Brassica carinata ChrB02 2 CH_bca_1097 2 2 0.000769551
Brassica oleracea C4 2 CH_bol_308 2 2 0.000196117
Cardamine hirsuta Chr4 2 CH_chi_107 3 3 0.0000000286668
Capsella rubella scaffold_4 2 CH_cru_374 2 2 0.000438693
Eutrema salsugineum scaffold_10 2 CH_esa_182 2 2 0.0000761499
Lupinus albus Lalb_Chr08 2 CH_lal_274 2 2 0.000157447
Lonicera japonica GWHAAZE00000004 2 CH_lonja_549 2 2 0.000359324
Petunia axillaris Peaxi162Scf00141 2 CH_pax_236 2 3 0.00021106
Selenicereus undatus Scaffold_33675 2 CH_sun_246 2 2 0.000435983

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001