Functional clusters

Information

  • Type MapMan
  • Description Cell cycle organisation.organelle division.plastid division

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Solanum pennellii Spenn-ch03 1 CH_spe_573 4 53 0.000959153
Solanum pennellii Spenn-ch03 2 CH_spe_573 4 53 0.000959153

Available child term results

Ontology identifier Description Number of clusters
13.6.1.2.2 Cell cycle organisation.organelle division.plastid division.FtsZ ring placement.MinD-interacting factor (MCD1) 4
13.6.1.2.4 Cell cycle organisation.organelle division.plastid division.FtsZ ring placement.assembly factor (ARC3) 6
13.6.1.2.5 Cell cycle organisation.organelle division.plastid division.FtsZ ring placement.assembly regulator (ARC6) 3
13.6.1.2.6 Cell cycle organisation.organelle division.plastid division.FtsZ ring placement.assembly regulator (PARC6) 6
13.6.1.3 Cell cycle organisation.organelle division.plastid division.dynamin-like protein (ARC5) 10
13.6.1.4 Cell cycle organisation.organelle division.plastid division.ARC5-recruitment factor (PDV) 10
13.6.1.5 Cell cycle organisation.organelle division.plastid division.regulatory protein (GC1/SulA) 6
13.6.1.6 Cell cycle organisation.organelle division.plastid division.plastid-nucleoid partitioning factor (YLMG1) 8
13.6.1.7 Cell cycle organisation.organelle division.plastid division.thylakoid integrity regulatory factor (FZL) 14
13.6.1.8.1.1 Cell cycle organisation.organelle division.plastid division.peptidoglycan system.UDP-N-acetylmuramic acid formation.enzyme MurA 10
13.6.1.8.1.2 Cell cycle organisation.organelle division.plastid division.peptidoglycan system.UDP-N-acetylmuramic acid formation.enzyme MurB 4
13.6.1.8.2.1 Cell cycle organisation.organelle division.plastid division.peptidoglycan system.UDP-N-acetylmuramic acid pentapeptide formation.enzyme MurC 2
13.6.1.8.2.2 Cell cycle organisation.organelle division.plastid division.peptidoglycan system.UDP-N-acetylmuramic acid pentapeptide formation.enzyme MurD 1
13.6.1.8.2.3 Cell cycle organisation.organelle division.plastid division.peptidoglycan system.UDP-N-acetylmuramic acid pentapeptide formation.enzyme MurE 4
13.6.1.8.2.4 Cell cycle organisation.organelle division.plastid division.peptidoglycan system.UDP-N-acetylmuramic acid pentapeptide formation.enzyme MurF 2
13.6.1.8.2.5 Cell cycle organisation.organelle division.plastid division.peptidoglycan system.UDP-N-acetylmuramic acid pentapeptide formation.D-alanine:D-alanine ligase (DDL) 2
13.6.1.8.3.1 Cell cycle organisation.organelle division.plastid division.peptidoglycan system.GlcNAc:UDP-N-acetylmuramic acid pentapeptide-PP-undecaprenol formation.enzyme MraY 8
13.6.1.8.3.2 Cell cycle organisation.organelle division.plastid division.peptidoglycan system.GlcNAc:UDP-N-acetylmuramic acid pentapeptide-PP-undecaprenol formation.enzyme MurG 4
13.6.1.8.4.1 Cell cycle organisation.organelle division.plastid division.peptidoglycan system.peptidoglycan cross-linking.bifunctional transglycosylase and transpeptidase (PBP) 2
13.6.1.8.4.2 Cell cycle organisation.organelle division.plastid division.peptidoglycan system.peptidoglycan cross-linking.low-MW D,D-carboxypeptidase (DAC) 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001