Functional clusters

Information

  • Type MapMan
  • Description Cell cycle organisation.organellar DNA replication.single-stranded DNA (ssDNA) maintenance.ssDNA-binding protein (OSB)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_228 1 CH_aag_11 22 80 0.000000000000558912
Anthoceros agrestis Sc2ySwM_362 1 CH_aag_117 6 8 0.000150394
Anthoceros agrestis Sc2ySwM_344 1 CH_aag_15 19 64 0.0000000000176828
Anthoceros agrestis Sc2ySwM_228 1 CH_aag_150 6 9 0.000441687
Anthoceros agrestis Sc2ySwM_228 1 CH_aag_25 9 13 0.0000000538116
Anthoceros agrestis Sc2ySwM_368 1 CH_aag_26 11 24 0.0000000910565
Anthoceros agrestis Sc2ySwM_340 1 CH_aag_37 9 16 0.000000805441
Anthoceros agrestis Sc2ySwM_362 1 CH_aag_4 26 74 5.54599e-19
Anthoceros agrestis Sc2ySwM_340 1 CH_aag_45 15 72 0.00000530833
Anthoceros agrestis Sc2ySwM_369 1 CH_aag_56 10 28 0.0000176013
Anthoceros agrestis Sc2ySwM_117 1 CH_aag_59 12 46 0.0000214202
Anthoceros agrestis Sc2ySwM_368 1 CH_aag_86 13 60 0.0000512214
Anthoceros agrestis Sc2ySwM_344 1 CH_aag_9 23 78 0.000000000000018226
Ceratophyllum demersum 1 1 CH_cde_24 3 3 0.0000000374281
Chenopodium quinoa C_Quinoa_Scaffold_2963 1 CH_cqu_618 2 2 0.000995025
Chlamydomonas reinhardtii chromosome_12 1 CH_cre_32 2 2 0.000113733
Glycine max Gm14 1 CH_gma_611 2 2 0.00079707
Nelumbo nucifera chr8 1 CH_nnu_459 2 3 0.000784787
Nicotiana tabacum Nitab4.5_0000187 1 CH_nta_164 2 2 0.000658364
Sequoiadendron giganteum chr2 1 CH_sgi_453 3 3 0.0000000142393
Utricularia gibba unitig_748 1 CH_ugi_258 2 2 0.000440755
Anthoceros agrestis Sc2ySwM_228 2 CH_aag_11 22 80 0.000000000000558912
Anthoceros agrestis Sc2ySwM_362 2 CH_aag_117 6 8 0.000150394
Anthoceros agrestis Sc2ySwM_344 2 CH_aag_15 19 64 0.0000000000176828
Anthoceros agrestis Sc2ySwM_228 2 CH_aag_150 6 9 0.000441687
Anthoceros agrestis Sc2ySwM_228 2 CH_aag_25 9 13 0.0000000538116
Anthoceros agrestis Sc2ySwM_368 2 CH_aag_26 11 24 0.0000000910565
Anthoceros agrestis Sc2ySwM_340 2 CH_aag_37 9 16 0.000000805441
Anthoceros agrestis Sc2ySwM_362 2 CH_aag_4 26 74 5.54599e-19
Anthoceros agrestis Sc2ySwM_340 2 CH_aag_45 15 72 0.00000530833
Anthoceros agrestis Sc2ySwM_369 2 CH_aag_56 10 28 0.0000176013
Anthoceros agrestis Sc2ySwM_117 2 CH_aag_59 12 46 0.0000214202
Anthoceros agrestis Sc2ySwM_368 2 CH_aag_86 13 60 0.0000512214
Anthoceros agrestis Sc2ySwM_344 2 CH_aag_9 23 78 0.000000000000018226
Ceratophyllum demersum 1 2 CH_cde_24 3 3 0.0000000374281
Chenopodium quinoa C_Quinoa_Scaffold_2963 2 CH_cqu_618 2 2 0.000995025
Chlamydomonas reinhardtii chromosome_12 2 CH_cre_32 2 2 0.000113733
Glycine max Gm14 2 CH_gma_611 2 2 0.00079707
Nelumbo nucifera chr8 2 CH_nnu_459 2 3 0.000784787
Nicotiana tabacum Nitab4.5_0000187 2 CH_nta_164 2 2 0.000658364
Sequoiadendron giganteum chr2 2 CH_sgi_453 3 3 0.0000000142393
Utricularia gibba unitig_748 2 CH_ugi_258 2 2 0.000440755

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001