Functional clusters

Information

  • Type MapMan
  • Description Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.class I interference-sensitive crossover pathway.double Holliday junction resolving protein (MLH3)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr3 1 CH_acertr_255 2 2 0.000070497
Amborella trichopoda AmTr_v1.0_scaffold00044 1 CH_atr_160 2 2 0.0000794407
Camellia sinensis var. sinensis Chr2 1 CH_camsi_896 2 4 0.000825322
Capsella rubella scaffold_7 1 CH_cru_245 2 2 0.0000731154
Davidia involucrata GWHABJS00000012 1 CH_din_242 2 2 0.0000500125
Erythranthe guttata scaffold_12 1 CH_egut_338 2 3 0.000218436
Lupinus albus Lalb_Chr16 1 CH_lal_183 2 2 0.0000524824
Malus domestica Chr15 1 CH_mdo_431 2 2 0.000113763
Zea mays 2 1 CH_zma_66 3 4 0.0000000627446
Acer truncatum chr3 2 CH_acertr_255 2 2 0.000070497
Amborella trichopoda AmTr_v1.0_scaffold00044 2 CH_atr_160 2 2 0.0000794407
Camellia sinensis var. sinensis Chr2 2 CH_camsi_896 2 4 0.000825322
Capsella rubella scaffold_7 2 CH_cru_245 2 2 0.0000731154
Davidia involucrata GWHABJS00000012 2 CH_din_242 2 2 0.0000500125
Erythranthe guttata scaffold_12 2 CH_egut_338 2 3 0.000218436
Lupinus albus Lalb_Chr16 2 CH_lal_183 2 2 0.0000524824
Malus domestica Chr15 2 CH_mdo_431 2 2 0.000113763
Zea mays 2 2 CH_zma_66 3 4 0.0000000627446

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001