Functional clusters

Information

  • Type MapMan
  • Description Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.class I interference-sensitive crossover pathway.MSH4-MSH5 Holliday junction stabilizing heterodimer.component MSH5

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Helianthus annuus HanXRQChr03 1 CH_han_242 3 6 0.000000179178
Hydrangea macrophylla Hma1.2p1_0036F.1 1 CH_hma_109 2 2 0.000111086
Vanilla planifolia CM028150.1 1 CH_vpl_75 3 12 0.00000180108
Zea mays 8 1 CH_zma_147 2 2 0.0000511313
Helianthus annuus HanXRQChr03 2 CH_han_242 3 6 0.000000179178
Hydrangea macrophylla Hma1.2p1_0036F.1 2 CH_hma_109 2 2 0.000111086
Vanilla planifolia CM028150.1 2 CH_vpl_75 3 12 0.00000180108
Zea mays 8 2 CH_zma_147 2 2 0.0000511313

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001