Functional clusters

Information

  • Type MapMan
  • Description Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic double strand break processing.MRE11-RAD50-NBS1 (MRN) complex.component RAD50

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group21 1 CH_ach_207 2 3 0.000488869
Amaranthus hybridus AmaHy_arrow1_Scaffold_4 1 CH_amhyb_112 2 2 0.0000841751
Brassica carinata ChrB01 1 CH_bca_880 2 4 0.000384762
Cicer arietinum L. Ca_LG5_v3 1 CH_car_2 5 11 0.000000000000127143
Chenopodium quinoa C_Quinoa_Scaffold_4257 1 CH_cqu_343 2 2 0.000142146
Lonicera japonica GWHAAZE00000006 1 CH_lonja_153 3 3 0.00000000537991
Magnolia biondii Chr07 1 CH_mbi_315 2 2 0.0000485661
Rhododendron simsii chr02 1 CH_rsi_323 2 2 0.0000645307
Sapria himalayana scaffold42_4718812 1 CH_shi_19 4 14 0.00000000056132
Utricularia gibba unitig_0 1 CH_ugi_118 2 2 0.0000734592
Actinidia chinensis Lachesis_group21 2 CH_ach_207 2 3 0.000488869
Amaranthus hybridus AmaHy_arrow1_Scaffold_4 2 CH_amhyb_112 2 2 0.0000841751
Brassica carinata ChrB01 2 CH_bca_880 2 4 0.000384762
Cicer arietinum L. Ca_LG5_v3 2 CH_car_2 5 11 0.000000000000127143
Chenopodium quinoa C_Quinoa_Scaffold_4257 2 CH_cqu_343 2 2 0.000142146
Lonicera japonica GWHAAZE00000006 2 CH_lonja_153 3 3 0.00000000537991
Magnolia biondii Chr07 2 CH_mbi_315 2 2 0.0000485661
Rhododendron simsii chr02 2 CH_rsi_323 2 2 0.0000645307
Sapria himalayana scaffold42_4718812 2 CH_shi_19 4 14 0.00000000056132
Utricularia gibba unitig_0 2 CH_ugi_118 2 2 0.0000734592

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001