Functional clusters

Information

  • Type MapMan
  • Description Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic double strand break initiation.accessory protein (PRD1/MEI1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr3 1 CH_acertr_278 2 2 0.000070497
Cardamine hirsuta Chr7 1 CH_chi_218 2 2 0.0000691204
Davidia involucrata GWHABJS00000016 1 CH_din_249 2 2 0.0000500125
Lonicera japonica GWHAAZE00000003 1 CH_lonja_274 3 17 0.00000365681
Rosa chinensis RcHm_v2.0_Chr4 1 CH_rch_797 2 7 0.000837087
Salvia bowleyana GWHASIU00000001 1 CH_sbo_365 2 4 0.000272975
Tripterygium wilfordii NC_052242.1 1 CH_twi_171 2 2 0.0000557507
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_222 2 2 0.0000929238
Vanilla planifolia CM028162.1 1 CH_vpl_48 3 6 0.000000163771
Acer truncatum chr3 2 CH_acertr_278 2 2 0.000070497
Cardamine hirsuta Chr7 2 CH_chi_218 2 2 0.0000691204
Davidia involucrata GWHABJS00000016 2 CH_din_249 2 2 0.0000500125
Lonicera japonica GWHAAZE00000003 2 CH_lonja_274 3 17 0.00000365681
Rosa chinensis RcHm_v2.0_Chr4 2 CH_rch_797 2 7 0.000837087
Salvia bowleyana GWHASIU00000001 2 CH_sbo_365 2 4 0.000272975
Tripterygium wilfordii NC_052242.1 2 CH_twi_171 2 2 0.0000557507
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_222 2 2 0.0000929238
Vanilla planifolia CM028162.1 2 CH_vpl_48 3 6 0.000000163771

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001