Functional clusters

Information

  • Type MapMan
  • Description Cell cycle organisation.mitosis and meiosis.sister chromatid separation.spindle assembly checkpoint machinery.checkpoint protein (TANMEI)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-4 1 CH_aar_144 2 2 0.0000912326
Acer truncatum chr13 1 CH_acertr_277 2 2 0.000070497
Carica papaya supercontig_140 1 CH_cpa_328 2 4 0.000570342
Gossypium raimondii Chr10 1 CH_gra_338 2 4 0.000321647
Lonicera japonica GWHAAZE00000004 1 CH_lonja_357 2 2 0.0000598874
Malus domestica Chr15 1 CH_mdo_336 3 20 0.00000983066
Nicotiana tabacum Nitab4.5_0000402 1 CH_nta_94 2 2 0.000109727
Pisum sativum chr5LG3 1 CH_psa_212 2 2 0.0000521635
Rosa chinensis RcHm_v2.0_Chr6 1 CH_rch_413 3 15 0.0000108403
Sequoiadendron giganteum chr3 1 CH_sgi_1015 2 3 0.000146142
Aethionema arabicum LG-4 2 CH_aar_144 2 2 0.0000912326
Acer truncatum chr13 2 CH_acertr_277 2 2 0.000070497
Carica papaya supercontig_140 2 CH_cpa_328 2 4 0.000570342
Gossypium raimondii Chr10 2 CH_gra_338 2 4 0.000321647
Lonicera japonica GWHAAZE00000004 2 CH_lonja_357 2 2 0.0000598874
Malus domestica Chr15 2 CH_mdo_336 3 20 0.00000983066
Nicotiana tabacum Nitab4.5_0000402 2 CH_nta_94 2 2 0.000109727
Pisum sativum chr5LG3 2 CH_psa_212 2 2 0.0000521635
Rosa chinensis RcHm_v2.0_Chr6 2 CH_rch_413 3 15 0.0000108403
Sequoiadendron giganteum chr3 2 CH_sgi_1015 2 3 0.000146142

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001