Functional clusters

Information

  • Type MapMan
  • Description Cell cycle organisation.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.component SMC3/TTN7

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 1 CH_arhy_283 3 6 0.000000940964
Amborella trichopoda AmTr_v1.0_scaffold00029 1 CH_atr_174 2 2 0.0000794407
Coffea canephora chr1 1 CH_ccan_173 2 6 0.0000255533
Erythranthe guttata scaffold_14 1 CH_egut_283 2 2 0.0000728147
Helianthus annuus HanXRQChr06 1 CH_han_427 2 2 0.0000386429
Lupinus albus Lalb_Chr04 1 CH_lal_193 2 2 0.0000524824
Lonicera japonica GWHAAZE00000002 1 CH_lonja_42 8 56 1.11028e-17
Lactuca sativa Lsat_1_v8_lg_2 1 CH_lsa_525 2 6 0.000770931
Medicago truncatula chr3 1 CH_mtr_601 2 2 0.000123259
Rosa chinensis RcHm_v2.0_Chr7 1 CH_rch_573 2 2 0.000119596
Sapria himalayana scaffold48_4099315 1 CH_shi_80 2 4 0.0000571804
Solanum pennellii Spenn-ch06 1 CH_spe_272 2 2 0.000044479
Trifolium pratense Tp57577_TGAC_v2_LG1 1 CH_tpr_359 2 2 0.000454184
Trifolium pratense Tp57577_TGAC_v2_LG4 1 CH_tpr_360 2 2 0.000454184
Vigna mungo CM024072.1 1 CH_vmu_185 2 2 0.0000646141
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 2 CH_arhy_283 3 6 0.000000940964
Amborella trichopoda AmTr_v1.0_scaffold00029 2 CH_atr_174 2 2 0.0000794407
Coffea canephora chr1 2 CH_ccan_173 2 6 0.0000255533
Erythranthe guttata scaffold_14 2 CH_egut_283 2 2 0.0000728147
Helianthus annuus HanXRQChr06 2 CH_han_427 2 2 0.0000386429
Lupinus albus Lalb_Chr04 2 CH_lal_193 2 2 0.0000524824
Lotus japonicus Contig00564 2 CH_lja_256 2 2 0.0000715077
Lonicera japonica GWHAAZE00000002 2 CH_lonja_42 8 56 1.11028e-17
Lactuca sativa Lsat_1_v8_lg_2 2 CH_lsa_525 2 6 0.000770931
Rosa chinensis RcHm_v2.0_Chr7 2 CH_rch_573 2 2 0.000119596
Sapria himalayana scaffold48_4099315 2 CH_shi_80 2 4 0.0000571804
Solanum pennellii Spenn-ch06 2 CH_spe_272 2 2 0.000044479
Trifolium pratense Tp57577_TGAC_v2_LG1 2 CH_tpr_359 2 2 0.000454184
Trifolium pratense Tp57577_TGAC_v2_LG4 2 CH_tpr_360 2 2 0.000454184
Vigna mungo CM024072.1 2 CH_vmu_185 2 2 0.0000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001