Functional clusters

Information

  • Type MapMan
  • Description Cell cycle organisation.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.activator protein (CDC20)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_7 1 CH_aly_409 2 2 0.000660044
Arabidopsis thaliana Chr4 1 CH_ath_369 2 2 0.000429738
Brassica carinata Contig789 1 CH_bca_917 2 2 0.000448905
Brassica napus A02 1 CH_bna_480 3 17 0.0000771521
Brassica napus C04 1 CH_bna_496 3 18 0.0000925759
Brassica oleracea C4 1 CH_bol_133 3 6 0.000000640939
Chara braunii BFEA01000557 1 CH_cbr_110 2 2 0.000215781
Capsella rubella scaffold_7 1 CH_cru_361 2 2 0.000438693
Gossypium hirsutum A11 1 CH_ghi_132 4 7 0.000000000139908
Olea europaea chr19 1 CH_oeu_84 3 7 0.000000598258
Punica granatum NC_045131.1 1 CH_pgr_317 2 2 0.000450214
Physcomitrium patens Chr21 1 CH_ppa_321 2 2 0.000919089
Papaver somniferum NC_039359.1 1 CH_pso_281 3 5 0.00000042609
Vitis vinifera chr5 1 CH_vvi_236 3 9 0.0000254921
Arabidopsis lyrata scaffold_7 2 CH_aly_409 2 2 0.000660044
Arabidopsis thaliana Chr4 2 CH_ath_369 2 2 0.000429738
Brassica carinata Contig789 2 CH_bca_917 2 2 0.000448905
Brassica oleracea C4 2 CH_bol_133 3 6 0.000000640939
Chara braunii BFEA01000557 2 CH_cbr_110 2 2 0.000215781
Capsella rubella scaffold_7 2 CH_cru_361 2 2 0.000438693
Eucalyptus grandis Chr03 2 CH_egr_856 3 49 0.000377784
Gossypium hirsutum A11 2 CH_ghi_132 4 7 0.000000000139908
Olea europaea chr19 2 CH_oeu_84 3 7 0.000000598258
Punica granatum NC_045131.1 2 CH_pgr_317 2 2 0.000450214
Physcomitrium patens Chr21 2 CH_ppa_321 2 2 0.000919089
Papaver somniferum NC_039359.1 2 CH_pso_281 3 5 0.00000042609
Vitis vinifera chr5 2 CH_vvi_236 3 9 0.0000254921

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001