Functional clusters

Information

  • Type MapMan
  • Description Cell cycle organisation.cell cycle control.cyclin-dependent regulation.cyclin-dependent protein kinase inhibitor activities.inhibitor (SIM)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB05 1 CH_bca_647 3 4 0.0000679776
Brassica carinata ChrB03 1 CH_bca_878 3 6 0.000339603
Brassica oleracea C2 1 CH_bol_243 3 4 0.000041939
Brassica rapa A02 1 CH_bra_205 3 4 0.0000723413
Camellia sinensis var. sinensis Chr13 1 CH_camsi_410 4 16 0.00000464117
Physcomitrium patens Chr24 1 CH_ppa_19 4 6 0.0000000103573
Physcomitrium patens Chr08 1 CH_ppa_5 5 7 0.00000000000444288
Sequoiadendron giganteum chr11 1 CH_sgi_128 6 7 3.99313e-17
Solanum lycopersicum SL4.0ch11 1 CH_sly_212 3 3 0.00000188102
Solanum pennellii Spenn-ch11 1 CH_spe_200 3 3 0.00000287565
Trifolium pratense Tp57577_TGAC_v2_LG4 1 CH_tpr_196 3 5 0.0000312656
Brassica carinata ChrB05 2 CH_bca_647 3 4 0.0000679776
Brassica carinata ChrB03 2 CH_bca_878 3 6 0.000339603
Brassica oleracea C2 2 CH_bol_243 3 4 0.000041939
Brassica rapa A02 2 CH_bra_205 3 4 0.0000723413
Camellia sinensis var. sinensis Chr13 2 CH_camsi_410 4 16 0.00000464117
Physcomitrium patens Chr24 2 CH_ppa_19 4 6 0.0000000103573
Physcomitrium patens Chr08 2 CH_ppa_5 5 7 0.00000000000444288
Sequoiadendron giganteum chr11 2 CH_sgi_128 6 7 3.99313e-17
Solanum lycopersicum SL4.0ch11 2 CH_sly_212 3 3 0.00000188102
Solanum pennellii Spenn-ch11 2 CH_spe_200 3 3 0.00000287565
Trifolium pratense Tp57577_TGAC_v2_LG4 2 CH_tpr_196 3 5 0.0000312656

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001