Functional clusters

Information

  • Type MapMan
  • Description Chromatin organisation.DNA methylation.cytosine methylation reader activities.methylation reader (MBD1-4/12)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_7 1 CH_aly_455 2 2 0.000990066
Camellia sinensis var. sinensis Chr14 1 CH_camsi_659 2 2 0.000137564
Capsicum annuum PGAv.1.6.scaffold1682 1 CH_can_178 3 7 0.00000143279
Cicer arietinum L. Ca_LG4_v3 1 CH_car_230 2 2 0.00023349
Chenopodium quinoa C_Quinoa_Scaffold_3416 1 CH_cqu_617 2 2 0.000995025
Medicago truncatula scaffold0019 1 CH_mtr_436 3 5 0.00000921364
Medicago truncatula chr3 1 CH_mtr_553 4 54 0.0000652663
Oryza sativa ssp. japonica chr05 1 CH_osa_317 2 2 0.000316874
Papaver somniferum NW_020624820.1 1 CH_pso_654 2 2 0.000630652
Salix brachista GWHAAZH00000008 1 CH_sbr_341 2 2 0.000378084
Solanum lycopersicum SL4.0ch10 1 CH_sly_166 3 3 0.000000180867
Solanum tuberosum ST4.03ch01 1 CH_stu_523 2 2 0.000307472
Trifolium pratense Tp57577_TGAC_v2_LG2 1 CH_tpr_394 2 3 0.000681233
Vaccinium macrocarpon scaffold00274_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_399 2 3 0.00083625
Arabidopsis lyrata scaffold_7 2 CH_aly_455 2 2 0.000990066
Camellia sinensis var. sinensis Chr14 2 CH_camsi_659 2 2 0.000137564
Capsicum annuum PGAv.1.6.scaffold1682 2 CH_can_178 3 7 0.00000143279
Cicer arietinum L. Ca_LG4_v3 2 CH_car_230 2 2 0.00023349
Chenopodium quinoa C_Quinoa_Scaffold_3416 2 CH_cqu_617 2 2 0.000995025
Oryza sativa ssp. japonica chr05 2 CH_osa_317 2 2 0.000316874
Papaver somniferum NW_020624820.1 2 CH_pso_654 2 2 0.000630652
Salix brachista GWHAAZH00000008 2 CH_sbr_341 2 2 0.000378084
Solanum lycopersicum SL4.0ch10 2 CH_sly_166 3 3 0.000000180867
Solanum tuberosum ST4.03ch01 2 CH_stu_523 2 2 0.000307472
Trifolium pratense Tp57577_TGAC_v2_LG2 2 CH_tpr_394 2 3 0.000681233
Vaccinium macrocarpon scaffold00274_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_399 2 3 0.00083625

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001