Functional clusters
Information
- Type MapMan
- Description Chromatin organisation.DNA methylation.ROS1-mediated DNA demethylation.ROS1-recruitment complex.transposon-derived factor HDP1
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | Contig1213 | 1 | CH_bca_681 | 2 | 4 | 0.000128256 |
| Lonicera japonica | GWHAAZE00000004 | 1 | CH_lonja_517 | 2 | 4 | 0.000359303 |
| Quercus lobata | 8 | 1 | CH_qlo_57 | 8 | 25 | 5.49082e-20 |
| Brassica carinata | Contig1213 | 2 | CH_bca_681 | 2 | 4 | 0.000128256 |
| Lonicera japonica | GWHAAZE00000004 | 2 | CH_lonja_517 | 2 | 4 | 0.000359303 |
| Quercus lobata | 8 | 2 | CH_qlo_57 | 8 | 25 | 5.49082e-20 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |