Functional clusters

Information

  • Type MapMan
  • Description Chromatin organisation.DNA methylation.RNA-independent DNA methylation.ASI1-AIPP1-EDM2 chromatin silencing regulator complex.component AIPP1/EDM3

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00002 1 CH_atr_171 2 2 0.0000794407
Camellia sinensis var. sinensis Chr5 1 CH_camsi_392 3 12 0.00000277457
Magnolia biondii Chr16 1 CH_mbi_321 2 2 0.0000485661
Rosa chinensis RcHm_v2.0_Chr4 1 CH_rch_165 4 12 0.000000000470307
Solanum lycopersicum SL4.0ch04 1 CH_sly_169 3 5 0.000000206684
Amborella trichopoda AmTr_v1.0_scaffold00002 2 CH_atr_171 2 2 0.0000794407
Camellia sinensis var. sinensis Chr5 2 CH_camsi_392 3 12 0.00000277457
Magnolia biondii Chr16 2 CH_mbi_321 2 2 0.0000485661
Rosa chinensis RcHm_v2.0_Chr4 2 CH_rch_165 4 12 0.000000000470307
Solanum lycopersicum SL4.0ch04 2 CH_sly_169 3 5 0.000000206684

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001