Functional clusters

Information

  • Type MapMan
  • Description Chromatin organisation.nucleosome remodeling.other chromatin remodeling activities.Rad5/16-like group.chromatin remodeling factor (Rad5-like)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-1 1 CH_aar_230 2 2 0.000547395
Amborella trichopoda AmTr_v1.0_scaffold00037 1 CH_atr_170 2 2 0.0000794407
Brassica rapa A10 1 CH_bra_367 2 4 0.000772709
Camellia sinensis var. sinensis Chr5 1 CH_camsi_645 2 2 0.000137564
Corylus avellana 5 1 CH_cav_239 2 2 0.0000766695
Carpinus fangiana Cfa06 1 CH_cfa_291 2 2 0.000227204
Pisum sativum chr5LG3 1 CH_psa_274 2 2 0.00015649
Sapria himalayana scaffold10_15062905 1 CH_shi_76 2 2 0.0000571804
Solanum lycopersicum SL4.0ch07 1 CH_sly_79 5 14 0.0000000000099716
Solanum pennellii Spenn-ch07 1 CH_spe_41 6 28 0.000000000000153474
Solanum tuberosum ST4.03ch07 1 CH_stu_282 3 10 0.00000472494
Trochodendron aralioides group9 1 CH_tar_403 2 4 0.000360198
Aethionema arabicum LG-1 2 CH_aar_230 2 2 0.000547395
Amborella trichopoda AmTr_v1.0_scaffold00037 2 CH_atr_170 2 2 0.0000794407
Brassica rapa A10 2 CH_bra_367 2 4 0.000772709
Camellia sinensis var. sinensis Chr5 2 CH_camsi_645 2 2 0.000137564
Corylus avellana 5 2 CH_cav_239 2 2 0.0000766695
Carpinus fangiana Cfa06 2 CH_cfa_291 2 2 0.000227204
Pisum sativum chr5LG3 2 CH_psa_274 2 2 0.00015649
Sapria himalayana scaffold10_15062905 2 CH_shi_76 2 2 0.0000571804
Solanum lycopersicum SL4.0ch07 2 CH_sly_79 5 14 0.0000000000099716
Solanum pennellii Spenn-ch07 2 CH_spe_41 6 28 0.000000000000153474
Solanum tuberosum ST4.03ch07 2 CH_stu_282 3 10 0.00000472494
Trochodendron aralioides group9 2 CH_tar_403 2 4 0.000360198

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001