Functional clusters
Information
- Type MapMan
- Description Chromatin organisation.post-translational histone modification.PRC1 bifunctional histone ubiquitination and methylation reader complex.associated factors.methylation reader (SHL/EBS)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Cardamine hirsuta | Chr8 | 1 | CH_chi_163 | 3 | 7 | 0.00000250748 |
| Helianthus annuus | HanXRQChr12 | 1 | CH_han_284 | 3 | 3 | 0.000000815342 |
| Helianthus annuus | HanXRQChr08 | 1 | CH_han_612 | 3 | 14 | 0.000296201 |
| Helianthus annuus | HanXRQChr16 | 1 | CH_han_664 | 3 | 16 | 0.000455532 |
| Lupinus albus | Lalb_Chr03 | 1 | CH_lal_287 | 3 | 10 | 0.000225178 |
| Lupinus albus | Lalb_Chr20 | 1 | CH_lal_56 | 4 | 4 | 0.000000000592011 |
| Lupinus albus | Lalb_Chr25 | 1 | CH_lal_60 | 4 | 5 | 0.00000000295929 |
| Lonicera japonica | GWHAAZE00000001 | 1 | CH_lonja_529 | 2 | 2 | 0.000359324 |
| Manihot esculenta | Chromosome12 | 1 | CH_mes_163 | 3 | 3 | 0.0000000559323 |
| Petunia axillaris | Peaxi162Scf00178 | 1 | CH_pax_347 | 2 | 2 | 0.000703556 |
| Quercus lobata | 3 | 1 | CH_qlo_880 | 2 | 2 | 0.000309773 |
| Sequoiadendron giganteum | chr11 | 1 | CH_sgi_600 | 3 | 7 | 0.00000124564 |
| Cardamine hirsuta | Chr8 | 2 | CH_chi_163 | 3 | 7 | 0.00000250748 |
| Helianthus annuus | HanXRQChr12 | 2 | CH_han_284 | 3 | 3 | 0.000000815342 |
| Helianthus annuus | HanXRQChr08 | 2 | CH_han_612 | 3 | 14 | 0.000296201 |
| Helianthus annuus | HanXRQChr16 | 2 | CH_han_664 | 3 | 16 | 0.000455532 |
| Lupinus albus | Lalb_Chr03 | 2 | CH_lal_287 | 3 | 10 | 0.000225178 |
| Lupinus albus | Lalb_Chr20 | 2 | CH_lal_56 | 4 | 4 | 0.000000000592011 |
| Lupinus albus | Lalb_Chr25 | 2 | CH_lal_60 | 4 | 5 | 0.00000000295929 |
| Lonicera japonica | GWHAAZE00000001 | 2 | CH_lonja_529 | 2 | 2 | 0.000359324 |
| Manihot esculenta | Chromosome12 | 2 | CH_mes_163 | 3 | 3 | 0.0000000559323 |
| Petunia axillaris | Peaxi162Scf00178 | 2 | CH_pax_347 | 2 | 2 | 0.000703556 |
| Quercus lobata | 3 | 2 | CH_qlo_880 | 2 | 2 | 0.000309773 |
| Sequoiadendron giganteum | chr11 | 2 | CH_sgi_600 | 3 | 7 | 0.00000124564 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |