Functional clusters

Information

  • Type MapMan
  • Description Chromatin organisation.post-translational histone modification.histone lysine methylation.histone methylation reader activities.histone H3K9 methylation reader (AGDP1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aquilegia oxysepala CHR06 1 CH_aox_106 3 5 0.00000540092
Aquilegia oxysepala CHR02 1 CH_aox_254 3 16 0.000301818
Camellia sinensis var. sinensis Chr9 1 CH_camsi_796 2 5 0.000458516
Gossypium hirsutum A03 1 CH_ghi_273 3 3 0.000000235284
Gossypium hirsutum D03 1 CH_ghi_317 3 4 0.00000094104
Gossypium raimondii Chr03 1 CH_gra_152 3 4 0.000000344872
Lactuca sativa Lsat_1_v8_lg_6 1 CH_lsa_386 2 2 0.000154202
Pisum sativum chr6LG2 1 CH_psa_242 3 47 0.000066108
Phaseolus vulgaris Chr11 1 CH_pvu_395 2 2 0.000440836
Quercus lobata 3 1 CH_qlo_405 4 28 0.000000126604
Solanum lycopersicum SL4.0ch01 1 CH_sly_400 2 2 0.000176082
Selenicereus undatus Scaffold_19641 1 CH_sun_191 2 2 0.000217992
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_415 2 2 0.000929238
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_416 2 2 0.000929238
Aquilegia oxysepala CHR06 2 CH_aox_106 3 5 0.00000540092
Aquilegia oxysepala CHR02 2 CH_aox_254 3 16 0.000301818
Camellia sinensis var. sinensis Chr9 2 CH_camsi_796 2 5 0.000458516
Gossypium hirsutum A03 2 CH_ghi_273 3 3 0.000000235284
Gossypium hirsutum D03 2 CH_ghi_317 3 4 0.00000094104
Gossypium raimondii Chr03 2 CH_gra_152 3 4 0.000000344872
Lactuca sativa Lsat_1_v8_lg_6 2 CH_lsa_386 2 2 0.000154202
Pisum sativum chr6LG2 2 CH_psa_242 3 47 0.000066108
Phaseolus vulgaris Chr11 2 CH_pvu_395 2 2 0.000440836
Quercus lobata 3 2 CH_qlo_405 4 28 0.000000126604
Solanum lycopersicum SL4.0ch01 2 CH_sly_400 2 2 0.000176082
Selenicereus undatus Scaffold_19641 2 CH_sun_191 2 2 0.000217992
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_415 2 2 0.000929238
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_416 2 2 0.000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001