Functional clusters
Information
- Type MapMan
- Description Chromatin organisation.post-translational histone modification.histone lysine methylation.histone methylation reader activities.histone H3K9 methylation reader (AGDP1)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Aquilegia oxysepala | CHR06 | 1 | CH_aox_106 | 3 | 5 | 0.00000540092 |
Aquilegia oxysepala | CHR02 | 1 | CH_aox_254 | 3 | 16 | 0.000301818 |
Camellia sinensis var. sinensis | Chr9 | 1 | CH_camsi_796 | 2 | 5 | 0.000458516 |
Gossypium hirsutum | A03 | 1 | CH_ghi_273 | 3 | 3 | 0.000000235284 |
Gossypium hirsutum | D03 | 1 | CH_ghi_317 | 3 | 4 | 0.00000094104 |
Gossypium raimondii | Chr03 | 1 | CH_gra_152 | 3 | 4 | 0.000000344872 |
Lactuca sativa | Lsat_1_v8_lg_6 | 1 | CH_lsa_386 | 2 | 2 | 0.000154202 |
Pisum sativum | chr6LG2 | 1 | CH_psa_242 | 3 | 47 | 0.000066108 |
Phaseolus vulgaris | Chr11 | 1 | CH_pvu_395 | 2 | 2 | 0.000440836 |
Quercus lobata | 3 | 1 | CH_qlo_405 | 4 | 28 | 0.000000126604 |
Solanum lycopersicum | SL4.0ch01 | 1 | CH_sly_400 | 2 | 2 | 0.000176082 |
Selenicereus undatus | Scaffold_19641 | 1 | CH_sun_191 | 2 | 2 | 0.000217992 |
Vaccinium macrocarpon | chr6_Vaccinium_macrocarpon_Stevens_v1 | 1 | CH_vma_415 | 2 | 2 | 0.000929238 |
Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 1 | CH_vma_416 | 2 | 2 | 0.000929238 |
Aquilegia oxysepala | CHR06 | 2 | CH_aox_106 | 3 | 5 | 0.00000540092 |
Aquilegia oxysepala | CHR02 | 2 | CH_aox_254 | 3 | 16 | 0.000301818 |
Camellia sinensis var. sinensis | Chr9 | 2 | CH_camsi_796 | 2 | 5 | 0.000458516 |
Gossypium hirsutum | A03 | 2 | CH_ghi_273 | 3 | 3 | 0.000000235284 |
Gossypium hirsutum | D03 | 2 | CH_ghi_317 | 3 | 4 | 0.00000094104 |
Gossypium raimondii | Chr03 | 2 | CH_gra_152 | 3 | 4 | 0.000000344872 |
Lactuca sativa | Lsat_1_v8_lg_6 | 2 | CH_lsa_386 | 2 | 2 | 0.000154202 |
Pisum sativum | chr6LG2 | 2 | CH_psa_242 | 3 | 47 | 0.000066108 |
Phaseolus vulgaris | Chr11 | 2 | CH_pvu_395 | 2 | 2 | 0.000440836 |
Quercus lobata | 3 | 2 | CH_qlo_405 | 4 | 28 | 0.000000126604 |
Solanum lycopersicum | SL4.0ch01 | 2 | CH_sly_400 | 2 | 2 | 0.000176082 |
Selenicereus undatus | Scaffold_19641 | 2 | CH_sun_191 | 2 | 2 | 0.000217992 |
Vaccinium macrocarpon | chr6_Vaccinium_macrocarpon_Stevens_v1 | 2 | CH_vma_415 | 2 | 2 | 0.000929238 |
Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 2 | CH_vma_416 | 2 | 2 | 0.000929238 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |