Functional clusters

Information

  • Type MapMan
  • Description Chromatin organisation.post-translational histone modification.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (PKDM9)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_5 1 CH_aly_298 2 2 0.000198013
Cardamine hirsuta Chr5 1 CH_chi_215 2 2 0.0000691204
Daucus carota DCARv2_Chr7 1 CH_dca_122 3 3 0.000000213555
Eutrema salsugineum scaffold_16 1 CH_esa_235 2 2 0.00022845
Glycine max Gm04 1 CH_gma_552 2 2 0.000569336
Glycine max Gm06 1 CH_gma_553 2 2 0.000569336
Lactuca sativa Lsat_1_v8_lg_1 1 CH_lsa_543 2 4 0.000925133
Schrenkiella parvula ch5-1 1 CH_spa_211 2 2 0.000236202
Arabidopsis lyrata scaffold_5 2 CH_aly_298 2 2 0.000198013
Cardamine hirsuta Chr5 2 CH_chi_215 2 2 0.0000691204
Daucus carota DCARv2_Chr7 2 CH_dca_122 3 3 0.000000213555
Eutrema salsugineum scaffold_16 2 CH_esa_235 2 2 0.00022845
Glycine max Gm04 2 CH_gma_552 2 2 0.000569336
Glycine max Gm06 2 CH_gma_553 2 2 0.000569336
Lactuca sativa Lsat_1_v8_lg_1 2 CH_lsa_543 2 4 0.000925133
Schrenkiella parvula ch5-1 2 CH_spa_211 2 2 0.000236202

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001