Functional clusters

Information

  • Type MapMan
  • Description Chromatin organisation.post-translational histone modification.histone lysine methylation.class-I histone methyltransferase activities.PRC2 histone methylation complex.VRN/FIS/EMF core subcomplexes.component FIE

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-8 1 CH_aar_136 2 2 0.0000912326
Brassica carinata ChrC05 1 CH_bca_47 4 4 0.00000000000205134
Brassica napus C05 1 CH_bna_130 4 15 0.0000000032927
Brassica napus A05 1 CH_bna_241 3 5 0.000000433599
Brassica oleracea C5 1 CH_bol_104 3 6 0.000000128197
Brassica rapa A05 1 CH_bra_38 4 5 0.00000000000593466
Lupinus albus Lalb_Chr14 1 CH_lal_238 2 3 0.000157443
Micromonas commoda Chr_10 1 CH_mco_7 2 2 0.000197961
Oryza sativa ssp. japonica chr08 1 CH_osa_296 2 4 0.000316857
Quercus lobata 8 1 CH_qlo_346 4 31 0.0000000129825
Aethionema arabicum LG-8 2 CH_aar_136 2 2 0.0000912326
Brassica carinata ChrC05 2 CH_bca_47 4 4 0.00000000000205134
Brassica oleracea C5 2 CH_bol_104 3 6 0.000000128197
Brassica rapa A05 2 CH_bra_38 4 5 0.00000000000593466
Lupinus albus Lalb_Chr14 2 CH_lal_238 2 3 0.000157443
Micromonas commoda Chr_10 2 CH_mco_7 2 2 0.000197961
Oryza sativa ssp. japonica chr08 2 CH_osa_296 2 4 0.000316857
Quercus lobata 8 2 CH_qlo_346 4 31 0.0000000129825

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001