Functional clusters

Information

  • Type MapMan
  • Description Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr4 1 CH_acertr_547 2 2 0.00070497
Arabidopsis lyrata scaffold_8 1 CH_aly_408 2 2 0.000660044
Arabidopsis thaliana Chr5 1 CH_ath_341 2 2 0.000286492
Cardamine hirsuta Chr8 1 CH_chi_411 2 2 0.000691204
Capsella rubella scaffold_8 1 CH_cru_142 3 3 0.000000160382
Erigeron canadensis Conyza_canadensis_scaffold:2 1 CH_eca_208 4 61 0.0000049296
Erythranthe guttata scaffold_4 1 CH_egut_103 4 6 0.00000000121585
Lupinus albus Lalb_Chr14 1 CH_lal_400 2 2 0.000787236
Quercus lobata 10 1 CH_qlo_560 3 9 0.00000671396
Acer truncatum chr4 2 CH_acertr_547 2 2 0.00070497
Arabidopsis lyrata scaffold_8 2 CH_aly_408 2 2 0.000660044
Arabidopsis thaliana Chr5 2 CH_ath_341 2 2 0.000286492
Cardamine hirsuta Chr8 2 CH_chi_411 2 2 0.000691204
Capsella rubella scaffold_8 2 CH_cru_142 3 3 0.000000160382
Erigeron canadensis Conyza_canadensis_scaffold:2 2 CH_eca_208 4 61 0.0000049296
Eucalyptus grandis Chr11 2 CH_egr_934 2 2 0.000877912
Erythranthe guttata scaffold_4 2 CH_egut_103 4 6 0.00000000121585
Lupinus albus Lalb_Chr14 2 CH_lal_400 2 2 0.000787236
Quercus lobata 10 2 CH_qlo_560 3 9 0.00000671396

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001