Functional clusters

Information

  • Type MapMan
  • Description Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.SNL-HDA19 histone deacetylase complex.associated component SAP30

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Carpinus fangiana Cfa04 1 CH_cfa_134 3 5 0.00000086023
Glycine max Gm04 1 CH_gma_412 2 2 0.000227734
Glycine max Gm06 1 CH_gma_413 2 2 0.000227734
Phaseolus vulgaris Chr09 1 CH_pvu_254 2 2 0.0000734727
Sequoiadendron giganteum chr6 1 CH_sgi_1296 2 4 0.000487151
Theobroma cacao Chromosome_5 1 CH_tca_427 2 2 0.000732386
Vigna mungo CM024072.1 1 CH_vmu_272 2 2 0.000193842
Vanilla planifolia CM028151.1 1 CH_vpl_308 2 2 0.000443328
Carpinus fangiana Cfa04 2 CH_cfa_134 3 5 0.00000086023
Glycine max Gm04 2 CH_gma_412 2 2 0.000227734
Glycine max Gm06 2 CH_gma_413 2 2 0.000227734
Phaseolus vulgaris Chr09 2 CH_pvu_254 2 2 0.0000734727
Sequoiadendron giganteum chr6 2 CH_sgi_1296 2 4 0.000487151
Theobroma cacao Chromosome_5 2 CH_tca_427 2 2 0.000732386
Vigna mungo CM024072.1 2 CH_vmu_272 2 2 0.000193842
Vanilla planifolia CM028151.1 2 CH_vpl_308 2 2 0.000443328

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001