Functional clusters

Information

  • Type MapMan
  • Description Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.HDA9-PWR deacetylation complex.component HOS15

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group8 1 CH_ach_56 3 7 0.00000154879
Brassica napus A07 1 CH_bna_503 2 2 0.000111309
Camellia sinensis var. sinensis Chr1 1 CH_camsi_172 4 11 0.00000000143129
Carica papaya supercontig_6 1 CH_cpa_150 2 2 0.0000950661
Medicago truncatula chr5 1 CH_mtr_594 2 2 0.000123259
Solanum lycopersicum SL4.0ch12 1 CH_sly_91 4 5 0.000000000106154
Solanum pennellii Spenn-ch12 1 CH_spe_135 3 3 0.0000000593529
Solanum tuberosum ST4.03ch12 1 CH_stu_449 2 2 0.000153736
Vitis vinifera chr18 1 CH_vvi_323 2 2 0.000228189
Actinidia chinensis Lachesis_group8 2 CH_ach_56 3 7 0.00000154879
Camellia sinensis var. sinensis Chr1 2 CH_camsi_172 4 11 0.00000000143129
Carica papaya supercontig_6 2 CH_cpa_150 2 2 0.0000950661
Solanum lycopersicum SL4.0ch12 2 CH_sly_91 4 5 0.000000000106154
Solanum pennellii Spenn-ch12 2 CH_spe_135 3 3 0.0000000593529
Solanum tuberosum ST4.03ch12 2 CH_stu_449 2 2 0.000153736
Vitis vinifera chr18 2 CH_vvi_323 2 2 0.000228189

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001