Functional clusters

Information

  • Type MapMan
  • Description Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.HDA9-PWR deacetylation complex.component PWR

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group3 1 CH_ach_220 2 2 0.000543213
Actinidia chinensis Lachesis_group22 1 CH_ach_29 3 3 0.0000000442632
Amborella trichopoda AmTr_v1.0_scaffold00108 1 CH_atr_156 2 2 0.0000794407
Corylus avellana 11 1 CH_cav_225 2 2 0.0000766695
Lactuca sativa Lsat_1_v8_lg_2 1 CH_lsa_545 2 3 0.000925157
Medicago truncatula chr6 1 CH_mtr_230 3 3 0.0000000101287
Utricularia gibba unitig_60 1 CH_ugi_199 2 2 0.000220378
Actinidia chinensis Lachesis_group3 2 CH_ach_220 2 2 0.000543213
Actinidia chinensis Lachesis_group22 2 CH_ach_29 3 3 0.0000000442632
Amborella trichopoda AmTr_v1.0_scaffold00108 2 CH_atr_156 2 2 0.0000794407
Corylus avellana 11 2 CH_cav_225 2 2 0.0000766695
Lactuca sativa Lsat_1_v8_lg_2 2 CH_lsa_545 2 3 0.000925157
Utricularia gibba unitig_60 2 CH_ugi_199 2 2 0.000220378

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001