Functional clusters

Information

  • Type MapMan
  • Description Chromatin organisation.post-translational histone modification.histone deacetylation

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Quercus lobata 10 1 CH_qlo_721 4 22 0.0000819363
Quercus lobata 10 2 CH_qlo_721 4 22 0.0000819363

Available child term results

Ontology identifier Description Number of clusters
12.3.2.1.1.1.2 Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.HDA9-PWR deacetylation complex.component PWR 13
12.3.2.1.1.1.3 Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.HDA9-PWR deacetylation complex.component HOS15 16
12.3.2.1.1.2.1 Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.SNL-HDA19 histone deacetylase complex.deacetylase component HDA19 6
12.3.2.1.1.2.2 Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.SNL-HDA19 histone deacetylase complex.key scaffold component SNL 10
12.3.2.1.1.2.4 Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.SNL-HDA19 histone deacetylase complex.associated component SAP30 16
12.3.2.1.1.2.5 Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.SNL-HDA19 histone deacetylase complex.associated component HDC1/Rxt3 8
12.3.2.1.1.3 Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.histone deacetylase (HDA8) 9
12.3.2.1.2 Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase 19
12.3.2.1.3 Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-III histone deacetylase 6
12.3.2.2 Chromatin organisation.post-translational histone modification.histone deacetylation.HD2 histone deacetylase 25
12.3.2.3 Chromatin organisation.post-translational histone modification.histone deacetylation.SIRTUIN histone deacetylase 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001