Functional clusters

Information

  • Type MapMan
  • Description Chromatin organisation.histone chaperone activities.histone chaperone (NAP)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr15 1 CH_camsi_230 3 5 0.0000000315391
Carya illinoinensis Chr03 1 CH_cil_498 2 2 0.000371897
Chenopodium quinoa C_Quinoa_Scaffold_4206 1 CH_cqu_623 2 2 0.000995025
Erythranthe guttata scaffold_12 1 CH_egut_379 2 2 0.000218444
Fragaria x ananassa Fvb6-3 1 CH_fan_360 3 5 0.000058926
Fragaria vesca Fvb2 1 CH_fve_291 3 5 0.0000691775
Fragaria vesca Fvb6 1 CH_fve_314 3 6 0.000138296
Fragaria vesca Fvb6 1 CH_fve_442 3 9 0.000580099
Magnolia biondii Chr16 1 CH_mbi_236 3 5 0.0000029712
Medicago truncatula chr2 1 CH_mtr_286 3 5 0.00000010128
Punica granatum NC_045129.1 1 CH_pgr_337 2 2 0.000450214
Populus trichocarpa Chr03 1 CH_ptr_109 4 6 0.000000000304102
Rosa chinensis RcHm_v2.0_Chr2 1 CH_rch_414 3 4 0.0000108676
Salix brachista GWHAAZH00000003 1 CH_sbr_166 3 7 0.00000416772
Simmondsia chinensis GWHAASQ00000014 1 CH_sci_271 2 2 0.000510856
Solanum lycopersicum SL4.0ch06 1 CH_sly_566 2 2 0.000880411
Solanum pennellii Spenn-ch06 1 CH_spe_513 2 2 0.000667186
Selenicereus undatus Scaffold_33673 1 CH_sun_258 2 2 0.000435983
Trifolium pratense Tp57577_TGAC_v2_scaf_400 1 CH_tpr_418 2 2 0.000756974
Tripterygium wilfordii NC_052235.1 1 CH_twi_224 2 2 0.000167252
Camellia sinensis var. sinensis Chr15 2 CH_camsi_230 3 5 0.0000000315391
Carya illinoinensis Chr03 2 CH_cil_498 2 2 0.000371897
Chenopodium quinoa C_Quinoa_Scaffold_4206 2 CH_cqu_623 2 2 0.000995025
Eucalyptus grandis Chr03 2 CH_egr_883 2 3 0.000526721
Erythranthe guttata scaffold_12 2 CH_egut_379 2 2 0.000218444
Fragaria x ananassa Fvb6-3 2 CH_fan_360 3 5 0.000058926
Fragaria vesca Fvb2 2 CH_fve_291 3 5 0.0000691775
Fragaria vesca Fvb6 2 CH_fve_314 3 6 0.000138296
Fragaria vesca Fvb6 2 CH_fve_442 3 9 0.000580099
Magnolia biondii Chr16 2 CH_mbi_236 3 5 0.0000029712
Punica granatum NC_045129.1 2 CH_pgr_337 2 2 0.000450214
Populus trichocarpa Chr03 2 CH_ptr_109 4 6 0.000000000304102
Rosa chinensis RcHm_v2.0_Chr2 2 CH_rch_414 3 4 0.0000108676
Salix brachista GWHAAZH00000003 2 CH_sbr_166 3 7 0.00000416772
Simmondsia chinensis GWHAASQ00000014 2 CH_sci_271 2 2 0.000510856
Solanum lycopersicum SL4.0ch06 2 CH_sly_566 2 2 0.000880411
Solanum pennellii Spenn-ch06 2 CH_spe_513 2 2 0.000667186
Selenicereus undatus Scaffold_33673 2 CH_sun_258 2 2 0.000435983
Trifolium pratense Tp57577_TGAC_v2_scaf_400 2 CH_tpr_418 2 2 0.000756974
Tripterygium wilfordii NC_052235.1 2 CH_twi_224 2 2 0.000167252

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001